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Repeats regions & their secondary structure in the PDBID : 1l9z_A

>1l9z_A mol:protein length:314 RNA POLYMERASE, ALPHA SUBUNIT
34-50
VTlGNPLRRIL..LSSIPG
53-70
VT.SVYIEDVLheFSTIPG
76-112
VEiILNlKELVVRFLDP..KMASTTLILRAEG..PKEvRAG
120-157
VE.IMN.PDLHIATLEEggKLYMEVRVDRGVGyvPAE.RHG
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Repeats regions & their secondary structure in the PDBID : 1l9z_B

>1l9z_B mol:protein length:314 RNA POLYMERASE, ALPHA SUBUNIT
34-50
VTlGNPLRRIL..LSSIPG
53-70
VT.SVYIEDVLheFSTIPG
76-112
VEiILNlKELVVRFLDP..KMASTTLILRAEG..PKEvRAG
120-157
VE.IMN.PDLHIATLEEggKLYMEVRVDRGVGyvPAE.RHG
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Repeats regions & their secondary structure in the PDBID : 1l9z_C

>1l9z_C mol:protein length:1118 RNA POLYMERASE, BETA SUBUNIT
21-246
IQVESYkKALQADVPPEK..R..ENVG......IQA.....AFKET.F.PIEEGDkgkG..GLVL...D.FLeyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedE.....VFLGHlP.L....................MTEDGSfIINGADRVIVSQiHR.....SPG...VYFTPDPARPGRYI.......A.SIIPLPKRGP................................WIDLEVEASG..VVTMKV.N...KRKFplVL..LLRVLGYDQ.E..TL..............VRELS.......AYgDLVQGL..LDEAVLAM.RPEEAMVRLFTLLRPGD..
247-393
....PP.KKDKA.......................................................................................................laylfGLLAD.P..KR.......YdlgeagrykAEEKLGV.GLSGRTLVR...................FEDGEFKDEVFLptlrylfALTAGV.......................................PGHEVDDI......DHL.G...NRRI..RTvgELMADQFRVgL..ARlargvrermvmgspDT.LT.......PA.KLVNSRP..LEAALREfFSRSQLSQ...........
394-570
.....F.KDETNPLSSLRHKRriSALGpggltrERAgfdvRDVHRTHYgRICPVE...TpeGANI...G..............................................................litslaaY.........ARVD.AL.GFIRTPY....R.RV.....KNGvvtEEVVYMTASEEDRY.......TIAQ....ANTP................................LEG.....DR..IATDRV.V...ARRR..GE..PVIVAPEEV.E..FM..............D..VS.......PK.QVFSLNTNL..IPFLE.HDDANRALMGSNMQTQAVP
571-754
LIRA......QAPV.........VMTG......LEE....RVVRDSLA.ALYAEE...D..GEVVkvdGtRI.....................................avryeD.....GRLVH.P.LRR.......Y.........ARSNQGT.AFDQRPRVRVGQ.RV.....KKG...DLLADGPASEEGFL.......ALGQNVLVAIMP................................FDGYNFEDAI..VISEEL.L...KRDF..YT..SIHIERYEI.E..AR..............DTKLG.......PE.RITRDIPHLSEAALRD.LDEEGIVRIGAEVKPGDIL
755-987
VGRTSF.KGEQEPSPEERLLR..SIFG......EKA....RDVKDTSL.RVPPGE...G..GIVV...G.RL.....................................rlrrgD....pGVELK.PgVRE.......V.........VR....V.FVAQKRKLQVGD.KLanrhgNKG...VVAKILPVEDMPHL.......PDGTPVDVILNPlgvpsrmnlgqilethlglagyflgqryispvFDGAT.EPEIkeLLAEAFnLyfgKRQ...GE..GFGVDKREK.EvlAR..............AEKLGlvspgksPE.EQLKELFDLGKVVLYD.....G..RTG.EPFEGPIV
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Repeats regions & their secondary structure in the PDBID : 1l9z_D

>1l9z_D mol:protein length:1524 RNA POLYMERASE, BETA-PRIME SUBUNIT
171-226
LPAGVDALVKDGEEVVKGQELAPGV.....VSRMD..GVAL..YRFPRRVRVDYLRKE......................raalriP
227-283
LSAWVEKEAYRPGEVL..AELSEPY.....LFRAEesGVVE..LKDLAEGHLIYLRQE.....................eevvaryF
284-354
LPAGMTPLVVEGEIVEVGQPLAEG..........K..G..L..LRLPRHMTAKEVEAEeegdsvhltlflewtepkdykvaphmnvI
355-402
VPEG..AKVQAGEKIVAAIDPEEEV.....IAEAE..GVVH..LHEPASILV...VKA.........................rvyP
403-442
F........EDDVEVTTGDRVAPGD.....VLADG..GKVK..SEIYGRVEVDLVRN..............................
452-494
....IDA..RMGAEAI..QELLKEL....dLEKLE..RELLeeMKHPSRARRAKARK..............................
1305-1340
LPKDARLLVKDGDYVEAGQPLTRGAidphqLLEAK..G.................................................
831-841
GR..ETSVGRLKF
870-882
GRrlETSPGRILF
715-731
AFQPVLVEGQSIQLH.PL
735-751
AFNADF.DGDQMAVHvPL
753-769
SFAQAEARIQMLSAH.NL
2-29
KKEVRKVRIALASPEK.IRSWSYGEV..EKP
796-826
RKEKKGAGMAFATPEEaLAAYERGEValNAP
591-637
VTNPGSERPLRSltDILSgkqgRFRQNLLGKRVDYSGRSVIVVGPQL
1381-1421
VTDPGDSRLLEG..QVLE....KWDVEALNERLIAEGKVPVAWKPLL
72-91
VCERC.GVEVtrSIVRRYRMG
1200-1218
VCQKCyGYDL..SMARPVSIG
326-346
EEGDSvHLTLFLEwTE..PKDYK
1284-1304
EEGED.RLSVFVE.SEgfSKEYK
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Repeats regions & their secondary structure in the PDBID : 1l9z_H

>1l9z_H mol:protein length:438 SIGMA FACTOR SIGA
184-203
ELKRYLHIAREGEAA....RQHLI
368-391
ELEKALSKLSEREAMvlklRKGLI
33-43
AAE.DLQDLPEP
49-60
ASEpELEDLADP
103-155
IGQVPlltleeeidLARKVE.EGMEAIKKLSE.ATGLDQELIREVVRAKILGTAR
235-271
..............LIRAVE.K.FEYKRRFKF.ST.YATWWIRQAINRAIADQAR
272-300
TIRIP...............vHMVETINKLSRtARQLQQELGRE...........
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