A Simple Perl CGI

A Simple Perl CGI

Repeats regions & their secondary structure in the PDBID : 1n6q_A

>1n6q_A mol:protein length:558 Reverse Transcriptase

169-303	EPFKkqNPDIVIYQYMDDLYVGsdlEIGQHRTKIEEL.RQHLLRWGlTTPDKKH..QKEPPFLWMgYELHPDKWTVQ.PIV..LPEKDSWTVNDICKLVGklnwASQIY.PGIKVRQlSKLLRG....TKALTEVIPLTE..EAELEL
344-479	EPFK..NLKTGKYARMRGAHTN...DVKQLTEAVQKItTESIVIWG.KTPKFKLpiQKETWETWW.TEYWQATWIPEwEFVntPPLVKLWYQLEKEPIVG....AETFYvDGAANRE.TKLGKAgyvtNKGRQKVVPLTNttNQKTEL
	HHHHxxHH TTSEEEEETTEEExxxEEESS HHHHHHxHHHHHHHHxHHTTT Bxx S EES xSSEEETTEEE xSSExxEEE SS BHHxxxxHHHHHxHHHHHHHxHTTSS xxxx HHHHHHHTTxxT SS
	SSS xxEEEEEE SSSB xxxHHHHHHHHHHHHxHHHHHHHHxSS EEExxESS HHHHHxHHHHH SS x SxxEEE SS xxxxSS SxSS EEEExEE BTxxxxTTTEEEEEEE TxxTS EEE

Repeats regions & their secondary structure in the PDBID : 1n6q_B

>1n6q_B mol:protein length:430 Reverse Transcriptase

169-229	EPFKkqNPDIVIYQYMDDLYVGsdlEIGQHRTKIEEL.RQHLLRWGlTTPDKKH..QKEPPFLW
344-401	EPFK..NLKTGKYARMRGAHTN...DVKQLTEAVQKItTESIVIWG.KTPKFKLpiQKETWETW
	HHHHxxHHSSS EEEEETTEEExxxEEE S HHHHHHxHHHHHHHHxHHTTT xx S
	ETTExxEEEEE TT TT xxxHHHHHHHHHHHHxHHHHHHHTxSS EEEExxESS HHHH
25-71	PLTEEKIKALVEiCTEMEKEgKISKIgPENPYNTPVFAIKKKDSTKW
294-337	PLTEEAELELAE.NREILKE.PVHGV.YYDPSKDLIAEIQKQGQGQW
	HHHHHHHHHxHHHHHHHxTTSEExE TT B EEEEE TTT
	TTTHHHHHHxHHHTTSSx TT x TTS EEEEEEEEETTEE

Repeats regions & their secondary structure in the PDBID : 1n6q_L

>1n6q_L mol:protein length:211 Monoclonal Antibody (Light Chain)

10-40	SLSASLGD.RVTISCSASQDISSYL.NWYQQKP
63-95	SGSGSGTDySLTISNLEPEDIATYYcQQYSKFP
	EEEE TT x EEEEEE SS TT ExEEEEE T
	EEEEETTExEEEEESS TTS SEExEEEE SS

Repeats regions & their secondary structure in the PDBID : 1n6q_H

>1n6q_H mol:protein length:225 Monoclonal Antibody (Heavy Chain)

9-75	PG.IVQPSQPFRLTCTFSGFslSTSGIGVTWIRQPSGKGLEWLATIWWDDdnRYnpSLKSRLTVSKDT
136-197	PGsAAQTNSMVTLGCLVKGY..FPEPVTVTWNSGSLSSGVHTFPAVLQSD..LY..TLSSSVTVPSST
	SxEE TTS EEEEEEEESSxx S STTEEEEEEEE TTS EEEEEEETxxTSxx EE TTTTTTE
	xSS SSEEEEEEEEEExxEBSS EEEETTTTB SSEEE EESSxxSSxxEEEEEEEEEETT