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Repeats regions & their secondary structure in the PDBID : 1nov_A

>1nov_A mol:protein length:355 NODAMURA VIRUS COAT PROTEINS
144-202
..........GTSATDTAA..NVTafRYASMAAGVYPTSnlmqfagsiqVYKIP...LKQVLNSYsqtvATVPP..
204-261
NLAQNTIAIDGLEALDALP..NNN..YSGSFIEGCYSQS..........VCNEPEFEFHPIMEGY....ASVPPAN
272-331
NLTFSGARYTGLGDMDAIAilVTT..PTGAVNTAVLKVW..........ACVEYRPNPNSTLYEF....ARESPAN
xxxxxxxxxx SSTTSTTSxxSEExxEEEES EEEEEExxxxxxxxxx TTxxxT EEEExxxxEEE xx
EEEEEEEEES GGGGG xxSS xxEEEETTS EEEE xxxxxxxxxx B SSS EE S xxxxSBSS TT
EE SSS SB EEExxEEExxEE TT EEEEEExxxxxxxxxxEEEEEEEEE TTSSSTxxxxTT EE
3-20
SKAARRRRAapRQQQRQQ
25-40
SNQPRRRRA..RRTRRQQ
xx
xx
72-91
PGKgipdKFQGLV..LPKKHCL
99-116
PGK....QTMLLVapIPGIACL
xxxx SS xx SEEEEE
TTExxxxEEEEEExx TTEE
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Repeats regions & their secondary structure in the PDBID : 1nov_B

>1nov_B mol:protein length:355 NODAMURA VIRUS COAT PROTEINS
144-202
..........GTSATDTAA..NVTafRYASMAAGVYPTSnlmqfagsiqVYKIP...LKQVLNSYsqtvATVPP..
204-261
NLAQNTIAIDGLEALDALP..NNN..YSGSFIEGCYSQS..........VCNEPEFEFHPIMEGY....ASVPPAN
272-331
NLTFSGARYTGLGDMDAIAilVTT..PTGAVNTAVLKVW..........ACVEYRPNPNSTLYEF....ARESPAN
xxxxxxxxxx SSTTSGGGxxTEExxEEEES EEEEEEExxxxxxxxxx TTxxxT EEEExxxxEEE xx
EEEEEEEEEE GGGGG xxSS xxEEEETTS EEEEExxxxxxxxxx BSSSS EE S xxxxSBSS TT
EE SSS SB EEExxEEExxEE TT EEEEEExxxxxxxxxxEEEEEEEEE TTSGGGxxxxGG EE
3-20
SKAARRRRAapRQQQRQQ
25-40
SNQPRRRRA..RRTRRQQ
xx
xx
72-91
PGKgipdKFQGLV..LPKKHCL
99-116
PGK....QTMLLVapIPGIACL
xxxx SS xx SEEEEE
TTExxxxEEEEEExx SSEE
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 1nov_C

>1nov_C mol:protein length:355 NODAMURA VIRUS COAT PROTEINS
144-202
..........GTSATDTAA..NVTafRYASMAAGVYPTSnlmqfagsiqVYKIP...LKQVLNSYsqtvATVPP..
204-261
NLAQNTIAIDGLEALDALP..NNN..YSGSFIEGCYSQS..........VCNEPEFEFHPIMEGY....ASVPPAN
272-331
NLTFSGARYTGLGDMDAIAilVTT..PTGAVNTAVLKVW..........ACVEYRPNPNSTLYEF....ARESPAN
xxxxxxxxxx SSGGGGGGxxTEExxEEEES EEEEEEExxxxxxxxxx TTxxxT EEEExxxxEEE xx
EEEEEEEEETTGGGGG xxSS xxEEEETTS EEEEExxxxxxxxxx B SSS EE S xxxxSBSS TT
EE SSS SB EEExxEEExxEE TT EEEEEExxxxxxxxxxEEEEEEEEE TTSSGGxxxxGG EE
3-20
SKAARRRRAapRQQQRQQ
25-40
SNQPRRRRA..RRTRRQQ
TTHxxHHHHTS
xx
72-91
PGKgipdKFQGLV..LPKKHCL
99-116
PGK....QTMLLVapIPGIACL
xxxx SS xx SEEEEE
TTExxxxEEEEEExx SSEE
PDB View PDBsum View Pfam View