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Repeats regions & their secondary structure in the PDBID : 1sfo_A

>1sfo_A mol:protein length:1733 DNA-directed RNA polymerase II largest subuni
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
GG S SSxTTTHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTS
HHHHHHHHxHHHHHTT xxx x SHHHxxHH
HHHHTxx TTx S EEEEB SSTTxxx HHHHHxHHHHHHSxx
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x SSS SSx SHHHHSSS
EEE TTxS TTEEEExEHHHHTT B
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
E xxxxxx HHHHHHHHHHHHHHT B SS T
SEEEE xxxxxx EEE SSS EEE EEEESS STTTT
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
B xx SB EETTEEE x
SSSTT BS EE xxTT EE TTS TTSS SS B BB TxT E
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Repeats regions & their secondary structure in the PDBID : 1sfo_B

>1sfo_B mol:protein length:1224 DNA-directed RNA polymerase II 140 kDa polype
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxx B TTSSS S xx HHHHHHHHHHxxxxHH xx x HHHHxxxxxxHHTTSB HHHHTT xx EESSS
S EEEESxxxS SEE GGGGGGTTTTxxS BSB EEEExxxx SxxSS S SSEEExEEHHHHHxxxxxxTTTT EEEEEEEEE xxSS SS
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
STT HHHxHHHHHHHHHHxxxxxHTT SHHHHT
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
S EE xxx SSS EE HHH
EEEEETxxxTEEEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
TT S x SB SSHHHxHHHHHSEEE x x SS GGGTTTB SS SSTTTTTSEE
SS EExEEEEEEEE TTxT EEEEEEEEEE xSS ExE SSS EEEEEEE TTTS EETTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHTT STTHHH
BSB EEE
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Repeats regions & their secondary structure in the PDBID : 1sfo_C

>1sfo_C mol:protein length:318 DNA-directed RNA polymerase II 45 kDa polypep
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
GG GGxG S EEEx SS TT S
S HHHxHS GGGTTxS TTS
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Repeats regions & their secondary structure in the PDBID : 1sfo_E

>1sfo_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III 2
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
STTTxS xSHHHHHHHB SSSSB GGGT
TTHHxHH xTT EEE SS HHHHT
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
TS SxSEEE GGGGSS GGGSTTx EEEE HHHxxHHHHT
GGS xEE TT HHHHHHT TT EExEEEEE TTSSExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 1sfo_F

>1sfo_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III 2
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
SSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
HHHHHHHTTT
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Repeats regions & their secondary structure in the PDBID : 1sfo_H

>1sfo_H mol:protein length:146 DNA-directed RNA polymerases I, II, and III 1
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
TTxxx EEEEEE TTTS
SEExxxEEEE S
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