A Simple Perl CGI
HOME

Repeats regions & their secondary structure in the PDBID : 2j0u_A

>2j0u_A mol:protein length:374 ATP-DEPENDENT RNA HELICASE DDX48
141-169
TRAIKMLVldEADEMLNKGFKEQIYDVYR
197-223
TDPIRILV..KRDELTLEGIKQFFVAVER
TT EEExxETTHHHHHTTT HHHHHHH
SS EEE SxxS STT EEEEEE S
28-42
F.EKDTGIKVTVEHPD
44-59
LeEKFPQVAATGDGPD
HxHHHHHHHHHT EE
Ex SSTTTTHHHHHH
125-183
........................................NPPKTWEEIpalDKELKAKGKSAL.MFNLQ..EPyFTWPLIAADGGYAFKYENGKYDIKDVG
188-285
GAKAgltflVDliKNKHMNAdtdysiaeAAFNKGETAMTiNGPWAWSNI...DTSKVNYGVTVLPTFKGQPSKP.FVGVLSAGINAASPNKELAKEFLENYL
290-353
GLEA.....VN..KDKPLGA........VALKSYEEELA.KDPRIAATM...ENAQ..KG.EIMPNIP.QMSAF.WYAVRTAVINAAS..............
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE HHHHHHHxxxHHTS S TT xEEEETxxTHxHHHHTTT HHHHHHHHHTS TT EEEE
HHHHxxxxxHHxxHH SS ExxxxxxxxEE SS SxTT EEEEEExxx STTSHHHHHHHH xEEEE SSHHHHHHHHHHHHHSS EEE
S SExxxxxEExxE STT xxxxxxxx SEEExESS SSHHxxxHHHHxxHSx SSSSx EExEEEE GGGHHHHHxxxxxxxxxxxxxx
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 2j0u_B

>2j0u_B mol:protein length:374 ATP-DEPENDENT RNA HELICASE DDX48
141-169
TRAIKMLVldEADEMLNKGFKEQIYDVYR
197-223
TDPIRILV..KRDELTLEGIKQFFVAVER
TT EEExxETTHHHHTTTT HHHHHHH
SS EEE SxxS SSSEEEEEEE S
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 2j0u_T

>2j0u_T mol:protein length:114 PROTEIN CASC3
51-72
LF.....FEHDlrgQTQEEEVRPKGRQ
75-98
LWkdegrWEHD...KFREDEQAPKSRQ
xxxxx xxx
xxxxx xxx S
PDB View PDBsum View Pfam View