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Repeats regions & their secondary structure in the PDBID : 3hou_A

>3hou_A mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
TT S SSxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTS
HHHHHHHHxHHHHHHT xxx xS SHHHxxHH
HHHHTxx TTx SS EEEEB SS SxxxS HHHHHxHHHHHHBxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x TTS x HHHHHSSS
EEE TTxS TTEEEExEHHHHTTSEEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
B xxxxxx HHHHHTHHHHHHHSS EEESBT
EEEExxxxxxE EEE TTSSEEE EEEEE SS HHHHT
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
E SS SSSEEE xxS B EEEEETTEEEEE x
SSSSS EEEEEExxTTTEEEETTT TTSSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 3hou_M

>3hou_M mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
TT S SSxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTS
HHHHHHHHxHHHHHHT xxx xS SHHHxxHH
HHHHTxx TTx SS EEEEB SS SxxxS HHHHHxHHHHHHBxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x TTS x HHHHHSSS
EEE TTxS TTEEEExEHHHHTTSEEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
B xxxxxx HHHHHTHHHHHHHSS EEESBT
EEEExxxxxxE EEE TTSSEEE EEEEE SS HHHHT
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
E SS SSSEEE xxS B EEEEETTEEEEE x
SSSSS EEEEEExxTTTEEEETTT TTSSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 3hou_B

>3hou_B mol:protein length:1224 DNA-directed RNA polymerase II subunit RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxxEEEEE TTSS SSxx HHHHHTHHHHxxxxHH xx x HHHHxxxxxxHHTTSEEEEEHHHHTT xx EESST
SSEEEESxxxS B SEE TTHHHHTTTTxxS SEEEEEEExxxxB xxSS SGGGEEExEEHHHHHxxxxxxTTTT EEEEEEEEEE xx TTT
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
TT HHHxHHHHHHHHHHxxxxxHTT SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
EExxx TTS EE HHH
EEEEESxxxS EEEEESSHHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
S TTxSSEE SSHHHxHHHHHTEEE x TxTTS STTTTTB SS SSSSTTTSEE
TT ExEEEEEEEEEETTxTEEEEEEEEEEEE xTT ExEE SSS EEEEEEEE TTTS B TTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHTT STTTHH
EEE EE
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Repeats regions & their secondary structure in the PDBID : 3hou_C

>3hou_C mol:protein length:318 DNA-directed RNA polymerase II subunit RPB3
52-76
DGRFVTLQIWDTAGQERFKSLRTPF
81-105
DCCLLTFSVDDRQSFENLGNWQKEF
EEE SSS HHHHHHHHHHS GG
TTTS SSS TTTEEEEEEEEE
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Repeats regions & their secondary structure in the PDBID : 3hou_O

>3hou_O mol:protein length:318 DNA-directed RNA polymerase II subunit RPB3
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
GG GGxG S EE x SS SS
S HHHxHS GGGTTxS TTS
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Repeats regions & their secondary structure in the PDBID : 3hou_D

>3hou_D mol:protein length:221 DNA-directed RNA polymerase II subunit RPB4
20-31
EEENAATLQLGQ
43-54
EEEELIALNLSE
SSS G
EEE B TTH
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Repeats regions & their secondary structure in the PDBID : 3hou_P

>3hou_P mol:protein length:221 DNA-directed RNA polymerase II subunit RPB4
20-31
EEENAATLQLGQ
43-54
EEEELIALNLSE
TTS G
EEE B TTH
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Repeats regions & their secondary structure in the PDBID : 3hou_E

>3hou_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
STTTxS xHHHHHHHHB SSS B GGGT E
HHHHxHH xTT EEEE S SSB HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
TS SxSEEEEEESTTTSS GGGSTTx B HHHxxHHHHH
GGS xEE TT HHHHHTT TT EExEEEEEETTTEExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 3hou_Q

>3hou_Q mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
STTTx xHHHHHHHHB SSS B GGGT E
HHHHxHH xTT EEEE S SSB HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
TS SxSEEEEEESTTTSS GGGSTTx B HHHxxHHHHH
GGS xEE TT HHHHHTT TT EExEEEEEETTTEExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 3hou_F

>3hou_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
SSB
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 3hou_R

>3hou_R mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
SSB
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 3hou_H

>3hou_H mol:protein length:146 DNA-directed RNA polymerases I, II, and III s
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
TTxxx EEEEE TTSS
S ExxxEEEE S
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Repeats regions & their secondary structure in the PDBID : 3hou_T

>3hou_T mol:protein length:146 DNA-directed RNA polymerases I, II, and III s
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
SSxxx EEEEEEETTSS
S ExxxEEEE S
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