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Repeats regions & their secondary structure in the PDBID : 3i4n_A

>3i4n_A mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
HT S SSxHHHHHHHHHHHTHHHxxxHHHHHHSx HHHHHTxxTT
HHHHHHHHxHHHHHHT xxx x SHHHxxHH
HHHTTxx TTx S BEE SS SxxxS HHHHHxHHHHTTSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SS x BTTTB x HHHHHSTT
B TTxS TTEEEExEHHHHHH
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
E xxxxxx HHHHTTHHHHHHHHS EEES S
S B ExxxxxxE EEE TTSSEEE EEEEB SS HHHHT
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
SS TTS EE xxS B EEEEETTEEEEE SSSSS xS
SSSSS EEEEEExxTTTEEEETTT TTTT TT EEEE SxS
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Repeats regions & their secondary structure in the PDBID : 3i4n_B

>3i4n_B mol:protein length:1224 DNA-directed RNA polymerase II subunit RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxxEEEEE SSSS S xx HHHHHHHHHHxxxxHH xx x TTHHxxxxxxHHTSSEEEEEHHHHTT xx EESST
SSB BBSxxxS B SSB TTHHHHT TTxxS SEEEEEEExxxx SxxSSSSTTTEEExEEHHHHHxxxxxxTTTT B EEEEEE xx TTT
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
STT HHHxHHHHHHHHHHxxxxxGGG STTHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
B xxx SSS B HHH
EEETxxxTEEEEE S HHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
S TTxSSB S HHHxHHHHHSEEE SSS x TTTxTTS STTTTTB SS SSSBTTBEE
TT xEEEEEEEE SSxS EEEEEEE B xTT ExEB SSS EEEEEEE TTTS B TTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHHT STTTHH
EEE EE
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Repeats regions & their secondary structure in the PDBID : 3i4n_E

>3i4n_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxS xSHHHHTTS SS GGGT E
TTHHxHHSxTT EEEEE S SSB HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
TS SxSEE EESTTTSS STTSSSx B B HHHxxHHHHH
TTS xEE SS HHHHHTT TT EExEEEEE SSSSExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 3i4n_D

>3i4n_D mol:protein length:221 DNA-directed RNA polymerase II subunit RPB4
BTTTB G
EEE B TTH
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Repeats regions & their secondary structure in the PDBID : 3i4n_C

>3i4n_C mol:protein length:324 DNA-directed RNA polymerase II subunit RPB3
201-227
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG x TT SS
S HHHxHS GGGTTxS TTS
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Repeats regions & their secondary structure in the PDBID : 3i4n_F

>3i4n_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
21-38
TSFGPTFQ..ALQSFAYDDT
41-60
TSIGKSQSppTLRAWVHHNT
xx
xx
88-102
IVRNSGGLAVvlDSG
109-121
VLKEEKGFSI..DDG
HHHHHHHHHHxxHHH
S SS HHxxHHH
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