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Repeats regions & their secondary structure in the PDBID : 3ikm_A

>3ikm_A mol:protein length:1172 DNA polymerase subunit gamma-1
193-204
QEQ.LVVGHNVSF
210-222
REQyLIQGSRMRF
S x B B SSS
GTSxS SS
247-323
KQGKHKVQPP....TKQGQKSQRKARRGPAISSwDWLDISSVNSNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQ
627-666
....................................LDYLEVEAEAKMENLRAAVPGQPL.....ALTARGGPKDTQPSYH
669-725
NGPYNDVDIPgcwfFKLPHKDGNSCNVGSPFAK.DFL..PKMEDGTLQ.......AGPGGASGPRAL..............
HH xxxx x TTSHHHHHHHT SS S SSSS SSSSTTTT SSHHHHH
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx S SSHHxxxxxHHHHSS S SS TT
TTTS TTxxxx B TTT SS xSS xxSTHHHHHHTxxxxxxxSS SSSHHxxxxxxxxxxxxxx
39-104
QKHGLWGQPAV..P.LPDVELRLP............PLYG.DNLDQHFRLLAQKQSLP.YLEAANLL.LQAQLPPKPPAWAWAE
439-482
.......EPATasK.LP.IEGAGA............P..G.DPMDQE.DLGPCSEEEE.FQQ..DVM.ARACL...........
483-541
QK..LKGTTEL....LPKRPQHLP............GHPG......WYRKLCPRLDDPaWTPGPSLLsLQMRVTPKLMALTW.D
549-625
ERHG.WGY.LV..PgRRDNLAKLPtgttlesagvvcPYRAiESLYRKHCLEQGKQQLM.PQE.AGLA.EEFLLTDNSAIWQTVE
TTTT SSS xx x xxxxxxxxxxxx xSSHHHHHHHHHHHHHHHxHHHHHHHHxHH S SS
xxxxxxx xxSxS x xxxxxxxxxxxxSxxSxS x SS xSSSxxSHHxHHHHHxxxxxxxxxxx
HHxxHHHHHHHxxxxSSS SSSSSxxxxxxxxxxxxS xxxxxx SS SS x SSS xTTTTSTTTTTTTT x
SSS xB x xx x SSS xxxxxxxxxxxxSHHHxHHHHHH HHHHHHHHHxHHHxHHHHxHHHHHHHHHT
373-418
NWERYLAEAQGTYEEL..QREMKKSLMDLANDACQLLS...GER.YK...EDPWL
883-937
NYGRIYGAGQPFAERLlmQFNHRLTQQEAAEKAQQMYAatkGLRwYRlsdEGEWL
HHHHHHHHHHHHHHHHxxHHHHHHHHHHHHHHHHHH xxx S xTTxxxSTHHH
HHHHHHS THHHHHHxxHHHHS TTHHHHHHHHHHHHxxxHHHxHHxxx SSSS
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Repeats regions & their secondary structure in the PDBID : 3ikm_D

>3ikm_D mol:protein length:1172 DNA polymerase subunit gamma-1
193-204
QEQ.LVVGHNVSF
210-222
REQyLIQGSRMRF
SS x STT
HHHxTTTT
247-323
KQGKHKVQPP....TKQGQKSQRKARRGPAISSwDWLDISSVNSNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQ
627-666
....................................LDYLEVEAEAKMENLRAAVPGQPL.....ALTARGGPKDTQPSYH
669-725
NGPYNDVDIPgcwfFKLPHKDGNSCNVGSPFAK.DFL..PKMEDGTLQ.......AGPGGASGPRAL..............
HT xxxx x STTTTTSHHHHHT SSTTTSSSSSSGGGSS SHHHHHHH
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx SSS SHHxxxxxHHT SSSS S SS
SSS TTxxxx EE TTT SSS xSS xxSTHHHHHSSxxxxxxxSS S SS SSTxxxxxxxxxxxxxx
39-104
QKHGLWGQPAV..P.LPDVELRLP............PLYG.DNLDQHFRLLAQKQSLP.YLEAANLL.LQAQLPPKPPAWAWAE
439-482
.......EPATasK.LP.IEGAGA............P..G.DPMDQE.DLGPCSEEEE.FQQ..DVM.ARACL...........
483-541
QK..LKGTTEL....LPKRPQHLP............GHPG......WYRKLCPRLDDPaWTPGPSLLsLQMRVTPKLMALTW.D
549-625
ERHG.WGY.LV..PgRRDNLAKLPtgttlesagvvcPYRAiESLYRKHCLEQGKQQLM.PQE.AGLA.EEFLLTDNSAIWQTVE
HHTT SS xx x xxxxxxxxxxxx xSSHHHHHHHHHHHHHHHxHHHHHHHHxHH TT S
xxxxxxx S xxSxS x xxxxxxxxxxxxTxxTxT x S xS SxxSHHxHHHHHxxxxxxxxxxx
HHxxHHHHHHHxxxxSTT SSTTTxxxxxxxxxxxx xxxxxx SS SS xS SSS xGGGTSTTHHHHTT x
TTS xEE x xx x SSS xxxxxxxxxxxxTTHHxHHTTSS STTTHHHHHHxHHHxHHHHxHHHHHHTTS
373-418
NWERYLAEAQGTYEEL..QREMKKSLMDLANDACQLLS...GER.YK...EDPWL
883-937
NYGRIYGAGQPFAERLlmQFNHRLTQQEAAEKAQQMYAatkGLRwYRlsdEGEWL
HHHHHHHHHHHHHHHHxxHHHHHHHHHHHHHHHHHHS xxx SSxTTxxxSSHHH
HHHHSSS THHHHHHxxHHHHS SSHHHHHHHHHHHHxxxHHHxTTxxx SSSS
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Repeats regions & their secondary structure in the PDBID : 3ikm_B

>3ikm_B mol:protein length:427 DNA polymerase subunit gamma-2
48-148
LRKNLaaEWWTSVVVFREQVFPVDALHH..KPGPLLPGDSAFRLVSAETLREiLQDKELskeqLVAFLENVLKTSGK.LRENLLHGALEhyVNClDLVNKRLPY
198-291
LRHRL..QWWRKFAMSPSNFSSSDCQDEegRKGNKLYYNFPWGKELIETLWN.LGDHEL....LHMYPGNVSKLHGRdGRKNVVPCVLS..VNG.DLDRGMLAY
HHHHHxxHHHHHHHTTTTSTTS xxS BTTTTTTTTTTTTTTTTTTTxTTTTTTxxxxTTTTTTTTTTTTTTxTTTTTTB xxTHHxHHHHHHHHH
HHHHHxxHHHHSS SS S EEEE xxSS EEEE SS EEEEEEx B S xxxxSSTTSS SSGGGS xEESSSSEE xxB xEE GGGHH
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Repeats regions & their secondary structure in the PDBID : 3ikm_C

>3ikm_C mol:protein length:427 DNA polymerase subunit gamma-2
48-148
LRKNLaaEWWTSVVVFREQVFPVDALHH..KPGPLLPGDSAFRLVSAETLREiLQDKELskeqLVAFLENVLKTSGK.LRENLLHGALEhyVNClDLVNKRLPY
198-291
LRHRL..QWWRKFAMSPSNFSSSDCQDEegRKGNKLYYNFPWGKELIETLWN.LGDHEL....LHMYPGNVSKLHGRdGRKNVVPCVLS..VNG.DLDRGMLAY
HHHHHxxHHHHHHHHHHSS B xxS SSSS SS x xxxx x S S xxHHHxHHHHHHHHH
HHHHHxxHHHHHH SSTTS EE SxxSS EE EEETTEEE x TTSxxxxSHHHHS SS S x BSSSSB xx x SHHH
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Repeats regions & their secondary structure in the PDBID : 3ikm_E

>3ikm_E mol:protein length:427 DNA polymerase subunit gamma-2
48-148
LRKNLaaEWWTSVVVFREQVFPVDALHH..KPGPLLPGDSAFRLVSAETLREiLQDKELskeqLVAFLENVLKTSGK.LRENLLHGALEhyVNClDLVNKRLPY
198-291
LRHRL..QWWRKFAMSPSNFSSSDCQDEegRKGNKLYYNFPWGKELIETLWN.LGDHEL....LHMYPGNVSKLHGRdGRKNVVPCVLS..VNG.DLDRGMLAY
HHHHHxxHHHHTTTTTTSSTTB xxS SSSSSSSSSSSSSSSSSSSxSSSSSSxxxxSSSSSSSSSSSSSSxSSSSSS xxHHHxHHHTTHHHH
HHHHHxxHHHGGG S GGGEEEEEE SxxSSS EEEEEE TT EEExEEEESSxxxxSSSSSS S GGGT x GGGS xxEEExEEEBHHHHH
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Repeats regions & their secondary structure in the PDBID : 3ikm_F

>3ikm_F mol:protein length:427 DNA polymerase subunit gamma-2
48-148
LRKNLaaEWWTSVVVFREQVFPVDALHH..KPGPLLPGDSAFRLVSAETLREiLQDKELskeqLVAFLENVLKTSGK.LRENLLHGALEhyVNClDLVNKRLPY
198-291
LRHRL..QWWRKFAMSPSNFSSSDCQDEegRKGNKLYYNFPWGKELIETLWN.LGDHEL....LHMYPGNVSKLHGRdGRKNVVPCVLS..VNG.DLDRGMLAY
HHHHHxxHHHHHHHHHHSS B S xxS SSSS SS x xxxx x S S xxHHHxHHHHHHHHH
HHHHHxxHHHHHH SSGGG EE SxxSS EE EEETTEEE x TTSxxxxHHHHHS SS S x BSSSSB xx x SHHH
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