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Repeats regions & their secondary structure in the PDBID : 3jcm_A

>3jcm_A mol:protein length:2413 Pre-mRNA-splicing factor 8
49-69
LPPPPPPPS..NFEINAEEIVDF.............
71-106
LPPPPPPPGldELETKAEKKVELhgkrkldigkDTF
ETTTEEEEEEEEEE xTT ExEEEEEEEE xx xxB xxxxxxxxxx
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388-416
PHLYNSrPRSVRIPWY.NNPVSCIIQNDEE
420-448
PALFFD.PSLNPIPHFiDNNSSLNVSNTKE
xxxx
xxxx
770-790
MPESIRQKKARTIlQHLSEAW
804-823
MPAPIKKIIERYI.KSKADAW
xxx
xxx
1075-1152
DPNIADYItAKNNVVINFKDmshvNKYGLIR.GLKFASFIF.QYYGLV.IDLLLLGQERATDLAGPANNPNEFMQFKSKEV
1192-1267
DPNFENSI.GYNNRKCWPKD....SRMRLIRqDVNLGRAVFwEIQSRVpTSLTSIKWENAFVSVYSKNNPNLLFSMCGFEV
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875-903
TPEEATTIF.SVMVE........................................wLESRSFSPIPFPPL
904-972
TYKNDTKIL.VLALEDLKDVYaskvrlnasereelalieeaydnphdtlnrikkylLTQRVFKPVDITMM
974-1024
NYQNISPVYsVDPLEKITDAY.................ldqylwyeadqrklfpnwIKP.SDSEIP.PLL
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592-617
..HL..dynFNLKPTKTLTTKERKKSRLGN
618-643
SFHL..mreL.LKMMK.LIVDTHVQFRLGN
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115-140
AKKMTKKAKRSNLYTPKaEMPPEHLR
150-174
ASKMYNTDKKAFLGALK.YLPHAILK
xxx
xxx
470-495
LPNTkdAMSLYHSPFPFNRTKGKMVR
526-549
LKNY..VLNELHPTLPTNHNKTKLLK
xxxx
xxxx
238-372
RFPPFDDDEP.PLSYEQHIENIEPLDPI.NLPLDSQDDEYVKDwlYDSRPLEEDSKKVnGTSYK...KWSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKksfFNGkALNNAIpggPKFEPLYPREEEE.DYNEFNSIDR
1382-1512
RFPPAVFYTPkELGGLGMISASHILIPAsDLSWSKQTDTGITH..FRAGMTHEDEKLI.PTIFRyitTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEE...LEG.SWDRGI...PRISTLFQRDRHTlAYDRGHRIRR
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1690-1902
KSYKMN.SSAADITMESVHEWevskPSLlheTNDSFKgLITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYTT.DNVSMyPS.PTGVMIGIDLA....YNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGlQIYQSSVQEPFLnssnYAELFNNDIKL..FVDDTNVY...RVTVHKTFEGNVATKAINGCIFTLNPKtGHLFLKIIHTSVWAGQ
2020-2229
ESAKMIlLSDPTITIKSYHLW....PSF...TDEQWI.TIESQMRDLILTEYGRKYNVNISALTQTEIKDIILgQNIKA.PSvKRQKMAELEAArsekQNDEEAAGASTVMKTKTINAQGEEIVVVASADYESQTFSSKN.EWRKSAIANTLL....YLRLKNIYVSAddFVEEQNVYvlpKNLLKKFIEISDVKIQVAAFIYGMSAK.DHPKVKEIKTVVLVPQ
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Repeats regions & their secondary structure in the PDBID : 3jcm_S

>3jcm_S mol:protein length:196 Small nuclear ribonucleoprotein-associated protein B
141-157
TANAKHTSSNSREIAQP
xx
xx
45-62
LNECIEERVpkTQLDKLR
73-88
LNIKVEKRV..LGLTILR
EES EE x x xx EE E
EE EEEEx STTExEE BEEE xx
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Repeats regions & their secondary structure in the PDBID : 3jcm_O

>3jcm_O mol:protein length:196 Small nuclear ribonucleoprotein-associated protein B
141-157
TANAKHTSSNSREIAQP
xx
xx
45-62
LNECIEERVpkTQLDKLR
73-88
LNIKVEKRV..LGLTILR
EES EE x x xx EE E
EE EEEEx STTExEE BEEE xx
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Repeats regions & their secondary structure in the PDBID : 3jcm_B

>3jcm_B mol:protein length:465 U4/U6 small nuclear ribonucleoprotein PRP4
209-244
PLtQKLD..SHVGKIGAIDW.HPDS..NnQMISCAEDGLIK.....
257-295
...LLGDlvGHERRISDVKY.HPSG..K.FIGSASHDMTWRLWDAS
299-337
EL.LLQE..GHDKGVFSLSF.QCDG..S.LVCSGGMDSLSMLWDIR
341-379
KV.MTLA..GHSKPIYTVAW.SPNG..Y.QVATGGGDGIINVWDIR
383-425
EG.QLNQilAHRNIVTQVRFsKEDGgkK.LV.SCGYDNLINVYSSD
429-465
KM.GSLA..GHTDKIISLDI.SNNS..H.FLVSGGWDRSIKLWN..
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Repeats regions & their secondary structure in the PDBID : 3jcm_h

>3jcm_h mol:protein length:187 U6 snRNA-associated Sm-like protein LSm4
127-156
NNNGNSNrRPySQNRQYNNSNSSNINNSIN
HHHHHHHHxHHS x SS HHHHHHGxGGxSSSSSEEEEEE STTSSHH
GGSSSSSEEEEEE SxTTSSHxHHHHHHHHHHHx SxS SS HHHHHSSS SS
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Repeats regions & their secondary structure in the PDBID : 3jcm_I

>3jcm_I mol:protein length:494 Pre-mRNA-processing factor 31
72-93
QILPKIVDLKRILQQQEIDFIK
HHHHHHHHHHHHTT x x HHHHHTHHHHHHHHHHHHHHH
THHHHHHHHHHHHHHxH x HHHHHHHHHHHHHHHHHHHHHHHH
95-110
LPFFNEIIPLIKSNIK
HHHHHHHHHHHHHHHxHHHHHxHHHHHHHHH TTHHHHS SH
TTHHHHS SHHHHHxHHHHHxHH TTGGGSS THHHHHHHH
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Repeats regions & their secondary structure in the PDBID : 3jcm_G

>3jcm_G mol:protein length:899 Pre-mRNA-splicing factor 6
271-333
CPRSSDIWLENIRLHE......................SDVHY...CKTLV......A.............TAINFNPTSPLLWFKAIDLESttvnkyrvvrkalQE
334-394
IPRDEGLWKLAVSF.E......................ADKAQ...VIKML......E.............KATQFIPQSMDLLTAYTNLQS.yhnakmtlnsfrKI
395-464
LPQEPEIWIISTLLEErnnpdipvdklvsllkegllelSKNGY...KATL.sawlkrA.............EALNDAPNSNLT.CQAI...................
471-516
.......WLRESGEYE......................SELNN...VDQIL......EkmphskvqiavlkKLIQWDPCDTVLW.......................
698-747
VPNCPLLWVSLSKIDE......................IDLKNpvrARSIL......D.............RGLLKNPDDVLFYIAKIQME................
748-780
........IRL...........................GNLDQ...AELLV......T.............QALQKFPSNALLWVEQIKL.................
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828-843
LERALKKC.SRYGDTWV
859-875
LYNMFDQCePTYGPEWI
xxx
xxx
56-79
QSQPKDDEDD...EAANV...FKTLELKLA
83-112
KKRANEKDDDnsvDSSNVkrqFADLKESLA
TT xxxxxxxx
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583-601
IDQIIDFAPHNL.DLRFFKI
610-629
LDELRDFFQQTFsSLEDFKI
xxx
xxx
122-142
IPDATDFTR....RNK..RNRIQEQLN
182-201
TKNASNPIQ....VNK..PNAATDAL.
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Repeats regions & their secondary structure in the PDBID : 3jcm_K

>3jcm_K mol:protein length:469 U4/U6 small nuclear ribonucleoprotein PRP3
86-148
YERG......LKFYQ.....KGEISKriaQERTLQKQQEEEELKRKLKQeEDEKDKRKLIESGDLPNLELHEDK
x x xxxxxx xxxxx xxx x
x x xxxxxx xxxxx xxx SSSx GGGTS HHHHHHHHHHHTSSTT
344-391
FKNLQNPKIR....FKLKMnskelslkglclrirddgpgiiivvgneKSCKF
392-437
YENLVMKRIKWNEDFELHT......ntgdikmdmhnnsisktwegylQDCKF
438-463
.KGWFMK.VCNDQDSLLRT........................lgqfDSEHF
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Repeats regions & their secondary structure in the PDBID : 3jcm_H

>3jcm_H mol:protein length:1008 Pre-mRNA-splicing factor SNU114
940-957
VPGDV.LD..KDAFIPKLKPA
xxxxx
xxxxx
396-405
LKNLLRSNFR
421-430
LKHVLQLIFR
HHHHHHHHT GxGGTSSx HHHHHHHHHHHHS
HHHHHHHHS SSHHHxHHHHHxTT HHHHHHHHHH
157-178
SHKRIPDMsKNVELgWKPLRYL
579-598
SVKSKEDM.KQLKF.FKPLDYI
H SS SS HHHHHSxSS xSS SHHHHHH xS S xEEEEEEE
xxxx
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Repeats regions & their secondary structure in the PDBID : 3jcm_N

>3jcm_N mol:protein length:2163 Pre-mRNA-splicing helicase BRR2
969-994
FRESLVHSALCIL....KEQE.LVLY..DAEND
G SS EEEEEEEE x SHHHxHHHHHHHHHHHHHHHHHxxxxHTT EEEExx SSHH
HHHHHHHHHHHHHHHxTTSEExEETTTTEEEE HHHHHHxxxxHHTTx HHxxHHHHH
HHHHHT GGGTT x TTTHxHHHHHHHHS SS S xxxxSSSHHHHHHxxHHxxx
452-964
SFKRVK.PQydEIHIPAPSKPVIDYELKEITSlpDWCQEAFpssETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVlkaLSHHYNPKTKK..LNLSAFKIVYiaplkaLVQEQVREFQrRLAFLGIkVAELTGDSRLSRKQIDETQVLVSTP.......EKWdittRNSNNLAIVELvrlLIIDEIHLLHDD.RGPVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSfrpcplsqqfcgikernslkklkamndACYEKVLESINEGNQIIVFVHSRKET..........SRTATWLKNKFAEENITHKLTKndagskqilkteaanVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAwGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGrpRYDTF.GEGIIITDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKVPDISSDG
1307-1798
SFNGFKlPK..KFPPPTPLLENISISTSELGN..DDFSEVF...EFKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKTAMAELAL...LNHWRQNKGRAvyINPSGEKIDF......LLSDWNKRFS.HLAGGKI.INKLGNDPSLNLKLLAKSHVLLATPvqfellsRRW....RQRKNIQSLEL...MIYDDAHEISQGvYGAVYETLISRMIFIATQLEKKIRFVCLSNCLANARDFGEWAGMTKSNIYNFSPSeriepleiniqsfkdvehisfnfsmlqMAFEASAAAAGNRNSSSVFLPSRKDCmevasafmkfSKAIEWDMLNVEEEQIVPYIEK...............LTDGHLRAPLKHGVGILYKGMASNDERIVKRLYEYGAVSVLLISKDCS.AFACKTDEVIILGTNLYDGAEHKYMPYTINELLEMVGLAS..GNDSMaGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHG
EEEE SSEEEEEE x x BGGGSx TxxTGGGGS SSSB HHHHHHxxHHHHHS xxx S EEEEE SSS HHHHHHHHHHHHHHTTS SS S SSxxx EEEEE S HHxxHHHHHHHHHHxxxxxxHHHTTTT ExEE SS xSGGGTTTTT SEEEE HHHHHHHHHxxxxxxx TTxxxxTHHHHTTEEEExxxEETTGGGGGSTTxTHHHHHHHHHHHHS GGG EEEEEEES TTHHHHHHHTT GGGEEE GGGxxxxxxxxxxxxxxxxxxxxxxxxxxx SS EEEEEEEE SHHHHHHHHHHxxxxxxxxxxHHHHHHHHHHHTT EEEE SSxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHT HHHH S TTTTHHHHHHHHHHS STHHxHHHHTTEEEE SSS HHHHHHHHHHHHTTS SEEEE THHxxHHH x BSEEEEE EEEETTTTEEEE HHHHHHHTTSBS TTT S EEEEEEEEHHHHHHHHHH TTTTHHHHH
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1075-1239
KVNVLLQSYFSQLKFEgFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMlLNLCKSATTKMWPTNCPLRQ...FKTCPV.EVIKRLEASTVPWGDYLQLETPAEVGRAIRSEKY.GKQVYDLLKRFPKMSVT...CNAQPITRSV.MRFNIEIIADwIWDMNVHGSLE..PF
1925-2093
KVFLLLQAYFSRLELP.VDFQNDLKDILEKVVPLINVVVDILSANGYLNATTA.MDLAQMLIQGVWDVDNPLRQiphFNNKIL.EKCKEINVETV..YDIMALEDEERDEILTLTDSQ.LAQVAAFVNNYPNVELTyslNNSDSLISGVkQKITIQLTRD.VEPENLQVTSEkyPF
x x xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxx x x xx x xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
HHHHHHHHHHHT xxxxxxxxxxxxxxxx
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149-189
RQLKENEENEDGNiEERKEKIQHEL...GINIDSLKFNELVKLM
399-441
RELDSGDDQPQSS.EAKRTKFSNPAippVIDLEKIKFDESSKLM
x x x xxx
x x x xxx TT EEEE SSEEE
23-81
SNKVLKVDKRFMntsQNPQRdAEISQpKSMSgriSAKDMGQGLCNNInKGLKENDVAVE
282-331
SVPIYSIDEFFL...QRKLR.SELGY.KDTS...VIQDLSEKILNDI.ETLEHNPVALE
x x xxx x x xxx x
x x xxx x x xxx x
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