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Repeats regions & their secondary structure in the PDBID : 3k7a_A

>3k7a_A mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
TS S SxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTS
HHHHHHHHxHHHHHHT xxx xS SHHHxxHH
HHHTTxx SSx S EEEEE TT SxxxS HHHHHxHHHHHHSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x SSSSSSx TTHHHHSSS
EEE TTxS TTEEEExEHHHHHH EEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
EE xxxxxx TTHHHHHHHHHHHT EEES T
EEEEExxxxxxE EEE TTSSEEE EEEEEESS HHHHS
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
EE xx B EEETTEEEE GGGTSSSSx
TTSTT B B xxSS B SSS SSTT TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 3k7a_M

>3k7a_M mol:protein length:345 Transcription initiation factor IIB
101-122
.................TTDMRFT.....KELNKAQGK..NVMDKK
133-171
ITML...CDAAELPKIVKDCAKEAYKL.CHDEKTLKGK..SMESI.
185-213
...VARTFKEIQSLIHVKTK.EF.GKT.LNIMKNI...........
236-278
LTYIPRFCSHLGLPMQVTTSAEYTAKK.CKEIKEIAGK..SPITIA
288-330
LFQIPITAAKVGQTLQVT...EGTIKSgYKILYEHRDKlvDPQLIA
xxxxxxxxxxxxxxxxxS HHHHxxxxxHHHHHHHHHxxHTTSS
HHHHxxxHHHTT HHHHTHHHHHHHHxHSSS SS xx SHHHx
xxxSS HHHHHHSSS SHxHHxHHHxHHHHHHHxxxxxxxxxxx
x xx
xxx x xx
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Repeats regions & their secondary structure in the PDBID : 3k7a_F

>3k7a_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
SSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 3k7a_H

>3k7a_H mol:protein length:146 DNA-directed RNA polymerases I, II, and III s
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
TTxxx EEEEEEETTTS
S ExxxEEEE S
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Repeats regions & their secondary structure in the PDBID : 3k7a_C

>3k7a_C mol:protein length:318 DNA-directed RNA polymerase II subunit RPB3
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG EEEEx SSSSS
S HHHxHS GGGGGxS TT
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Repeats regions & their secondary structure in the PDBID : 3k7a_E

>3k7a_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxS xHHHHHHHHB SSS B GGGT E
TTHHxHH xSS EEEEE SSSEE HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
TSTTx EEEEEETHHHHS GGGSTTx EEEE TTHxxHHHHH
GGS xEE TT HHHHHTT TT EExEEEEE SSSSExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 3k7a_B

>3k7a_B mol:protein length:1224 DNA-directed RNA polymerase II subunit RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
S EExxxEEEEE TTSS S xx HHHHHHHHHHxxxxHHTxx x SHHHxxxxxxHHTTSEEEEETTGGGG xx EESST
S EEEESxxxS B SEE GGGGTTTTTTxxS SEEEEEEExxxxB xxSS SGGGEEExEEHHHHHxxxxxxHTTT EEEEEEEEE xx
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
TT HHHxHHHHHHHHHHxxxxxHTT SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
S EE xxx SSS EE HHH
EEEEETxxxTEEEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
GGGTTx SEE SSHHHxHHHHHTEEE SSx xTTS GGGTTTB SS SSTTTTTEEE
TT ExEEEEEEEEEETTxTEEEEEEEEEEEE xTT ExEE SSS EEEEEEEE TTTS EETTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHTT STTHHH
BSB EE
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