A Simple Perl CGI

A Simple Perl CGI

Repeats regions & their secondary structure in the PDBID : 3pcq_C

>3pcq_C mol:protein length:80 Photosystem I iron-sulfur center

8-25	DTCIGCTQCVRACPTDVL
45-62	EDCVGCKRCETACPTDFL
	TT HHHHH TT
	GG HHHHH SSS

Repeats regions & their secondary structure in the PDBID : 3pcq_D

>3pcq_D mol:protein length:138 Photosystem I reaction center subunit II

56-78	VY..FARKEQCLALAAQQLRPRKIN
82-106	IYriFPDGETVLIHPKDGVFPEKVN
	EExxESSHHHHHHHHHHHTGGGT
	EExxEE TT EEEEETTTSS SSS

Repeats regions & their secondary structure in the PDBID : 3pcq_K

>3pcq_K mol:protein length:83 Photosystem I reaction center subunit PsaK

16-25	GLVVILCNLF
42-51	GLPIALPALF
	HHHHH

Repeats regions & their secondary structure in the PDBID : 3pcq_L

>3pcq_L mol:protein length:154 Photosystem I reaction center subunit XI

4-21	LVKPYNGD.PFVGHLSTPI
26-44	LVKTFIGNlPAYRQGLSPI
	EEGGG xTTBB EE HH
	HHHHHHHTxSTTT TT H
45-59	LRGLEV....GMAHGYFLI
68-86	LRDSDVanlgGLISGIALI
	HHHHHHxxxxHHHHHHHHT
	TTTSTTxxxxHHHHHHHHH

Repeats regions & their secondary structure in the PDBID : 3pcq_B

>3pcq_B mol:protein length:740 Photosystem I P700 chlorophyll a apoprotein A

35-59	GM.TEENLYQ.KIF....AShfghLAIIFLW
127-153	GMrTNGDLYQgAIFllilAS....LALFAGW
	T x HHHHHHxHHHxxxxHHxxxxHHHHHHH
	T x SHHHHHxHHHxxxxHHxxxxHHHHHHH
176-233	..................................................HHL..AG....LFGVsslawAGHL..IHVAIPESRGQHVGWDNF.LST..........MPHPaglapfftgnwG..VYA....................
235-346	NPDT...ASHVFGTA.QGAGTAILT.FLGGFHPQTESLWLT....D.MAHHHLAIAV....LFIV.....AGHMYrTQFGIGHSIKEMMDAKDF.FGTKVEGPF...NMPHQ...........G..IYE.TYNNSLHFQLGWHLACLGV
347-441	..ITslvAQHMYSLP.PYA.......FIAQDHTTMAALYT..........HHQYIAG....FLMV.....GA......FAHG....AIFLVRDY.DPAQNKGNVldrVLQHK...........EaiISH.LSWVSLF..LGFHTLGLYV
483-595	NPDS..iAS....TAwPNYGNVWLPgWLDAINSGTNSLFLTigpgDfLVHHAIALGLhtttLILV.....KGALD......ARGSKLMPDKKDFgYAFPCDGP......GRG...........G..TCDiSAWDAFYLAMFWMLNTIGW
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHxxHTxxxxTTHHxxxxxHHHHxxHHHHHHHTHHHHHTT x TTxxxxxxxxxxTGGGxxxxxxxxxxxSxx SSxxxxxxxxxxxxxxxxxxxx
	S xxxTT TTSSxTT SS x S TTT S HHxxxxHxHHHHHHHHHHxxxxHHHHxxxxxHTTSBx TTS SB HHHHHH xBTTB SSGxxxGG xxxxxxxxxxxTxxTHHxHHHHH HHHHHHHHHHHHH
	xxHHxxxHHHHHHHHxHS xxxxxxx STTGGG HHHHHHxxxxxxxxxxHHHHHHHxxxxHHHHxxxxxHHxxxxxxHHHHxxxxHHHHHHHHxHT SGGGTxxxTSHHHxxxxxxxxxxxHxxHHHxTHHHHHHxxHHHHHHHHHH
	STTSxxxHHxxxxHHxTTTT SxHHHHHHHHHSSSS TxxxxTx HHHHHHxxxxHHHHxxxxxHHHHHxxxxxxHHHHHHHHHHHTSxS SS TTxxxxxxGGGxxxxxxxxxxxGxx S x S S SGGG TT SHHHH
50-102	FGHlaiiflwVSGSLFHVAWQGNFEQWVQDPV..NTR.PIAHAI.W.DPQFGKAAVDA
658-711	FGH....lvwATGFMFLISWRGYWQELIETLVwaHERtPLANLVrWkDKPVALSIVQA
	HHHxxxxxxxHHHHHHHHHHHHHHHHHHS HHxxHHHxH TTT x x EEEE TT
	HHHxxxxxxxHHHHHHHHHHHS HHHHHHHHHxxHHHxHHHHTSxTxTGGG SSB

Repeats regions & their secondary structure in the PDBID : 3pcq_A

>3pcq_A mol:protein length:755 Photosystem I P700 chlorophyll a apoprotein A

152-208	...................................................ITNEFQLYCTAIGGLVMAGLMLFAGWF.HYHKRAPKLEW..FQNVESMLNH......HLAG...LLGLG
288-340	...................................................VTGGLWLSDTAHHHLAIAVLFIIAG...HMY....RTNWgiGHSLKEILEA......HKGP...FTGAG
349-454	TT..swH......AQLAINlammgslsiivaqhmyamppypylatdyptqlSLFTHHMW...IGGFLVVGGAAHGAIF.MVRDYDPAMNQ..NNVLDRVLRHrdaiisHLNWvciFLGFH
455-498	SFglyvHndtmraFGRPQD................................MFSDTGIQLQPV..........FAQWVqNLHTLAP..................................
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx SHHHHHHHHHHHHHHHHHHHHHHHHxHHHTEEE HHHxxHT HHHHHHHxxxxxxHHHTxxxHHHHH
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTSS HHHHHHHHHHHHHHHHHHTxxxT Bxxxx SSxxS SB HHHHHxxxxxxHH xxx SSST
	HHxxxx xxxxxxHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHxxxHHHHHHHHHHHS STxT TT HHHHHHxxHHHHHHHHHHxxxxxxHHHHxxxHHHHH
	HHxxxxHxxxxxxHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHT GGGSBxxxxxxxxxxSTTSBx HHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
80-147	LAVVFIW.LSGMY.FHGAKFSN..YEA..WLADPTGIKPSAQvvwPiVGQGILNGDVGGGFHgiQITSGLFQLW
677-744	LGAHFIWaFSLMFlFSGRGYWQelIESivWAHNKLKVAPAIQ...P.RALSIIQGRAVGVAH..YLLGGIATTW
	HHHHHHHxHHHHHxHHHHHS xxHHHxxHHH TTTS EE xxx x TTGGGGSEEEExxTTEEEEE S
	HHHHHHHxHHHHHxHHHS HHHxxHHHxxHHHHHHHHHHHTTxxx x SSB HHHHHxxHHHHHHHHHH
219-234	VSLPINKLLDAGVAAK
236-251	IPLPHEFILNPSLMAE
	THHHHHHHHTTT ST
	S TTHHHH HHHHHH