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Repeats regions & their secondary structure in the PDBID : 3s16_A

>3s16_A mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
HH SS SSxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHTxxTS
HHHHHHHHxHHHHHHT SS S xxxTTSTT x HHHHxxHH
HHHHTxx SSx SS EEEEEB STTSxxxS HHHHHxHHHHHHSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x SSSSSSx TTHHHHSTT
EEE TTxS SSEEEExEHHHHTT EEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
EE xxxxxx HHHHHHHHHHHHHS EEES T
EEEEEExxxxxxEEEEEE TTSSEEEEEEEEEEEES HHHHH
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
B xx B EEETTEEEE x
TTSSS EEEEE xxTTS EE TTT TTSSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 3s16_B

>3s16_B mol:protein length:1224 DNA-directed RNA polymerase II subunit RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxxEEEEEEEE SSSS EEES xxBHHHHHHHHHHxxxxHHTxx x HHHHxxxxxxHHTTSEEEEEHHHHTT xx EESST
S EEEESxxxS B SEE GGGGTTTTTTxxS SEEEEEEExxxx xxSS S TTEEExEEHHHHHxxxxxxTTTT EEEEEEEEEES xxSS SS
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
TT HHHxHHHHHHHHHHxxxxxTSS SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
EEExxx TTS EEE HHH
EEEEETxxxTEEEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
GGGG x SB SSHHHxHHHHHTEEE x x SS GGGTTTB SS STTBTTBEE
TT EExEEEEEEEEE TTx EEEEEEEEEEE xSS ExEE SSS EEEEEEEE TTTS EETT
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHTTT SHHHHH
EEE EEEE
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Repeats regions & their secondary structure in the PDBID : 3s16_C

>3s16_C mol:protein length:318 DNA-directed RNA polymerase II subunit RPB3
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG S S EEEEx TT TT S
S HHHxHS GGGGGxS SS
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Repeats regions & their secondary structure in the PDBID : 3s16_E

>3s16_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxS xHHHHHHHHB SSS B HHHH E
HHHHxHH xTT EEEEE SSSEE SHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
SSSx EEEEEEHHHHTS TTSSTTx EEEE HHHxxHHHHH
TTS xEE TT HHHHHTT TT EExEEEEE SSSSExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 3s16_F

>3s16_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 3s16_H

>3s16_H mol:protein length:146 DNA-directed RNA polymerases I, II, and III s
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
SSxxx EEEEEEETTTS
T ExxxEEEEE S
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