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Repeats regions & their secondary structure in the PDBID : 4a3j_A

>4a3j_A mol:protein length:1732 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
HT S SSxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTT
HHHHHHHHxHHHHHHHTTS xxx x SHHHxxHH
HHHHTxx SSx SS EEEEE SS SxxxS HHHHHxHHHHHHSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x B TTSSBx HHHHHSSS
EEEETTxS TTEEEExEHHHHHH EEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
xxxxxx HHHHHHHHHHHHHT EEES T
EEEExxxxxxE EEE TTSSEEE EEEEE SS HHHHS
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
E SS SSSEE xxS B EESSS EE B STTT SxS B
SSSSS EEEEE xxTT EEETTT TTSSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 4a3j_B

>4a3j_B mol:protein length:1224 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxxEEEEEEES SSSS EES xx HHHHHHHHHHxxxxHHTxx x HHHHxxxxxxHHHTSEEEEEHHHHTT xx EESSS
SSB BSxxxS B SEE TTHHHHTTTTxxS SEEEEEEEExxxxB xxSS S SSEEExEEHHHHHxxxxxxTTTT EEEB EEEEE xx SSS
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
SS HHHxHHTTHHHHHHxxxxxHTT SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
EExxx SSSSEE HHH
EEEEETxxxTEEEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
S BSxSEEE SSHHHxHHHHHTEEE x x SS STTTTTB SS SSTTBTTEEE
TT ExEEEEEEEEE TTxS EEEEEEEEEEE xTT ExEE SSS EEEEEEEE TTTS EETTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHHT STTHHH
EEE EE
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Repeats regions & their secondary structure in the PDBID : 4a3j_C

>4a3j_C mol:protein length:318 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG EEEEEEEx SS S S
S HHHxHS GGGTTxS SSS
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Repeats regions & their secondary structure in the PDBID : 4a3j_D

>4a3j_D mol:protein length:221 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4
20-31
EEENAATLQLGQ
43-54
EEEELIALNLSE
SSS S
EEE B TTH
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Repeats regions & their secondary structure in the PDBID : 4a3j_E

>4a3j_E mol:protein length:215 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxS xHHHHHHHHB TTS B HHHH E
TTHHxHHSxTT EEEEE S SEE HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
SSTTxSEEEEEEHHHHTS STTSTTx EEEE HHHxxHHHHH
GGS xEE TT HHHHHTT TT EExEEEE TTTSSxxEEEEE
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Repeats regions & their secondary structure in the PDBID : 4a3j_F

>4a3j_F mol:protein length:155 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEEGGGS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 4a3j_H

>4a3j_H mol:protein length:146 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
SSxxx EEEEEEETTTS
S ExxxEEEE S
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