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Repeats regions & their secondary structure in the PDBID : 4by7_A

>4by7_A mol:protein length:1733 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
TT S SSxHHHHHHHHHHTHHHHxxxHHHHHHSx HHHHHHxxTT
HHHHHHHHxHHHHHHTS xxx x HHHHxxHH
HHHTTxx SSx SS EEEEEB STTSxxxS HHHHHxHHHHHHSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
SSS x TTS x HHHHHSSS
EEE TTxS TTEEEExEHHHHHHSEEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
EE xxxxxx SHHHHHHHHHHHHT EEES T
EEEEEExxxxxxEEEEEE TTSSEEEEEEEEEEEES HHHHH
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
E SS TTSEEE xxS B EEETTEEEEEE x E
TTSSS EEEEE xxSSS EEETTT TTSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 4by7_B

>4by7_B mol:protein length:1224 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
SS EExxxEEEEEEES SSSS EES xxBHHHHHHHHHHxxxxHH xx x HHHHxxxxxxHHTTSEEEEEHHHHTT xx EES S
S EEEESxxxS B SEE TTHHHHTTTTxxS EEEEEEExxxxB xxSSTT TTEEExEEHHHHHxxxxxxTTTT EEEEEEEEEE xxB SSS
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
TT HHHxHHTTHHHHHHxxxxxHTT SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
EE xxx SSSS EE HHH
EEEEESxxxS EEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
SS Sx EEE SSHHHxHHHHTTEEE x xTTS GGGTTTB SS SSTTTTTEEE
SS ExEEEEEEEEE TTxS EEEEEEEEEEE xTT ExEEETTS EEEEEEEE TTTS B TT
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHTT STTTHH
EEE EE
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Repeats regions & their secondary structure in the PDBID : 4by7_C

>4by7_C mol:protein length:318 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG BS EEExE SS SS S
S HHHxHS GGGGGxS SS
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Repeats regions & their secondary structure in the PDBID : 4by7_D

>4by7_D mol:protein length:221 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4
20-31
EEENAATLQLGQ
43-54
EEEELIALNLSE
SSSS S
EEE EE TTH
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Repeats regions & their secondary structure in the PDBID : 4by7_E

>4by7_E mol:protein length:215 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxT xHHHHHHHHB TTS B HHHH E
HHHHxHH xTT EEEEE SSSEE HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
GSTTxSEEEEEEHHHHSS GGGSTTx EEEE HHHxxHHHHH
GGS xEE TT HHHHHTT TT EExEEEE TTTS xxEEEEE
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Repeats regions & their secondary structure in the PDBID : 4by7_F

>4by7_F mol:protein length:155 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
SS
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 4by7_H

>4by7_H mol:protein length:146 DNA-DIRECTED RNA POLYMERASES I, II, AND III S
39-55
TLDINVELFPVAAQDSL
58-74
TIASSLNLEDTPANDSL
EEEEETTTS TT EE
E
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