A Simple Perl CGI

A Simple Perl CGI

Repeats regions & their secondary structure in the PDBID : 4llw_B

>4llw_B mol:protein length:212 light chain Clambda

8-89	PSSLSASvGDRVTITCKASQ..DVSIGVAWyqrKPGKAPklliYSASYRyTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ
121-195	PSSEELQ.ANKATLVCLISDfyPGAVTVAW...KADSSP....VKAGVE.TTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQ
	SEEEE xTT EEEEEEESxxS TT EExxxEEEE TxxxxTS EExEEETTTEE TT TTEEEEEETTEEEEEESS G
	HHHHHxTT EEEEEEEExxSS S EEExxxEEEETTxxxxEEEEEExEE EE EEEEEEEE HHHHHHSS EE

Repeats regions & their secondary structure in the PDBID : 4llw_D

>4llw_D mol:protein length:212 light chain Clambda

8-89	PSSLSASvGDRVTITCKASQ..DVSIGVAWyqrKPGKAPklliYSASYRyTGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ
121-195	PSSEELQ.ANKATLVCLISDfyPGAVTVAW...KADSSP....VKAGVE.TTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQ
	SEEEE xTT EEEEEEESxxS TT EExxxEEEE TxxxxTS EExEEETTTEE TT TTEEEEEETTEEEEEESS G
	HHHHHxTT EEEEEEEEExxEBSS EExxxEEEETTxxxxEE TTxEEE EE TTS EEEEEEEEE HHHHHHSS EE

Repeats regions & their secondary structure in the PDBID : 4llw_A

>4llw_A mol:protein length:448 mutated Pertuzumab Fab heavy chain

129-169	...P...................................LAPSS.kstSG..GTAALGCLVkdyFPEP..VTVSWNS.GALT...SGV
170-225	HTFP....................avlqssglyslssvvTVPSS....SL..GTQTYICNV...NHKPSNTKVDKKVEPKSC...DKT
226-269	HTCP...................................PCPAP....ELlgGPSVFL..F...PPKPKDTLMISRTPEVTCvvvDVS
270-337	HEDPevkfnwyvdgvevhnaktkpreeqynstyrvvsvlTV........L...HQDWL......NGKEYKCKVSNKALPAPI...EKT
342-393	KGQP.............................repqvyTLPPSrdelTK..NQVSLTCLV..kGFYPSDIAVEWESNGQPE...NNY
	xxxExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE xxxx xx EEEEExxxEEEExxEEBSS xEEEExxxGGG
	EE xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx EE TxxxxTSxx EEEEEEEExxxEEGGGTTT EEEEEEEGxxxGGT
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxx xx xx xxx xxx
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxx xxx xxxxxx xxx
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxx xx xxx xxx
16-60	GSLRLSCAASGFTFTdYTMDWVRyAPGKGLEWVADvnpNSGGSIY
66-105	GRFTLSVDRSKNTLY.LQMNSLR.AEDTAVYYCAR...NLGPSFY
	EEEEEEEESS GGxGS EEEExEEETTTEEEEExxxEEEETTT
	TTEEEEEEGGGTEEExEEE S xGGG EEEEEEExxxESSSS
106-123	FDYWGQGtlVTVSSASTK
277-292	FNWYVDG..VEVHNAKTK
	EEEE xxEEEEE SS
	xx

Repeats regions & their secondary structure in the PDBID : 4llw_C

>4llw_C mol:protein length:448 mutated Pertuzumab Fab heavy chain

129-169	...P...................................LAPSS.kstSG..GTAALGCLVkdyFPEP..VTVSWNS.GALT...SGV
170-225	HTFP....................avlqssglyslssvvTVPSS....SL..GTQTYICNV...NHKPSNTKVDKKVEPKSC...DKT
226-269	HTCP...................................PCPAP....ELlgGPSVFL..F...PPKPKDTLMISRTPEVTCvvvDVS
270-337	HEDPevkfnwyvdgvevhnaktkpreeqynstyrvvsvlTV........L...HQDWL......NGKEYKCKVSNKALPAPI...EKT
342-393	KGQP.............................repqvyTLPPSrdelTK..NQVSLTCLV..kGFYPSDIAVEWESNGQPE...NNY
	xxxExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE xxxx xx EEEEExxxEEEExxEEBSS xEEEExxxGGG
	EE xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx EE TxxxxTSxx EEEEEEEExxxEESTHHHH EEEEEEGxxxGGT
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxx xx xx xxx xxx
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxx xxx xxxxxx xxx
	xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxx xx xxx xxx
16-60	GSLRLSCAASGFTFTdYTMDWVRyAPGKGLEWVADvnpNSGGSIY
66-105	GRFTLSVDRSKNTLY.LQMNSLR.AEDTAVYYCAR...NLGPSFY
	EEEEEEEESS GGxGS EEEExEEETTTEEEEExxxEEE TTT
	T EEEEEEGGGTEEExEEE S xGGG EEEEEEExxxEETTEEE
106-123	FDYWGQGtlVTVSSASTK
277-292	FNWYVDG..VEVHNAKTK
	EEEE xxEEEEE S
	xx