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Repeats regions & their secondary structure in the PDBID : 4y7n_A

>4y7n_A mol:protein length:1733 DNA-directed RNA polymerase II subunit RPB1
1537-1554
VSSPGFSPTSPTYSPTSP
1558-1575
PTSPSYSPTSPSYSPTSP
1579-1596
PTSPSYSPTSPSYSPTSP
1600-1617
PTSPSYSPTSPSYSPTSP
1621-1638
PTSPSYSPTSPSYSPTSP
1642-1659
PTSPSYSPTSPSYSPTSP
1663-1680
PTSPSYSPTSPSYSPTSP
1684-1701
PTSPSYSPTSPNYSPTSP
1705-1719
PTSPGYSPGSPAYSP...
xxx
1463-1494
EDGQDGGVTPYSN.ESGLVNADLDVKDELMFSP
1501-1533
NDAMAGGFTAYGGaDYGEATSPFGAYGEAPTSP
x
x
995-1039
ENLLVLRGKNeIIQNAQRDAVTLFCCllrSRLATRR.VLQEYRL..TK
1062-1102
EMVGVLAAQS.IGEPATQMTLNTFHF...AGVASKK.VTSGVPR..LK
1103-1144
EILNV..AKN.MKTPSLTVYLEPGHA...ADQEQAKlIRSAIEHttLK
GG S SSxHHHHHHHHHHHHHHHxxxHHHHHHSx HHHHHHxxTT
BHHHHHHHHxHHHHHTT xxx xS HHHHxxHH
HHHTTxx SSx SS EEEEB SS SxxxS HHHHHxHHHHHHSxx E
308-333
IAGQPQ.ALQKSGRPvKSIRARLKGKE
353-378
ISGDPNlELDQVGVP.KSIAKTLTYPE
TTS x SSSS x HHHHTSSS
EEE TTxS TTEEEExEHHHHTT EEE
1241-1277
RVVRPK......SLDAETEAEEDHMLKKIENTMLENITLRGVE
1281-1323
RVVMMKydrkvpSPTGEYVKEPEWVLETDGVNLSEVMTVPGID
E xxxxxx TTTTHHHHHHHHHS EEES S
EEEE xxxxxx EEE TTSSEEE EEEESS HHHHS
153-199
PSEDDPTQLVSR..GGCGNTQPTIRKDGLKLVGSWKKDRATGDADePEL
396-443
PNEHPGAKYVIRdsGDRIDLRYSKRAGDIQLQYGWKVERHIMDND.PVL
xx B B EETTEEEEB x
TSSSS EEEEE xxSS EEESSS TTSSS TT EEEEE TxT E
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Repeats regions & their secondary structure in the PDBID : 4y7n_B

>4y7n_B mol:protein length:1224 DNA-directed RNA polymerase II subunit RPB2,D
628-716
TDAGRVY...RPLFIVEDDESLGHKELKVrkGHIAKLMATEYqdieGGF..EDVEEYTWSSlLNEGLVE......YIDAEEEESILIAMQPEdlEPAEAN
791-881
TMANILYypqKPLGTTRAMEYLKFRELPA..GQNAIVAIACY....SGYnqEDSMIMNQSS.IDRGLFRslffrsYMDQEKKYGMSITETFE..KPQRTN
TT EExxxEEEEEEE TTSS EESSxxBHHHHHHHHHHxxxxHH xx x HHHHxxxxxxHHTTSEEEEEHHHHTT xx EESSG
SEEEEESxxxS B SEE GGGGGGTTTTxxS EEEEEEExxxx BSxxSS S SSEEExEEHHHHHxxxxxxTTTT EEEEEEEEEES xxSS SS
141-169
DVPGRELkYELIAEESED.....DSESGKVFIGR
304-336
DVNDWQM.LEMLKPCVEDgfviqDRETALDFIGR
x xxxxx EEEE
TT HHHxHHHHHHHHHHxxxxxGGG SHHHHH
98-119
TKPMVNesdGVTHALYPQEARL
578-596
TRVFVN...GVWHGVHRNPARL
EE xxx TTS EE HHH
EEEEETxxxTEEEEEES HHHH
474-539
SSRAG.VSQVLNRYTYSS.TLSHLRRTNTPIGRDG.KLAKpRQLHNTHWGLVCPAETPEGQACGLVKNL
943-1010
STENGiVDQVLVTTNQDGlKFVKVRVRTTKIPQIGdKFAS.RHGQKGTIGITYRREDMPFTAEGIVPDL
SS S xSEEE SSHHHxHHHHHTEEE x xTTS GGGTTTB SS GGGBTTBEE
TT EExEEEEEEEEEETTxTEEEEEEEEEEEE xTT ExEEESSS EEEEEEEE GGGS EETTS
283-298
VIIFRALGIIPDGEIL
910-925
VIIGKTTPISPDEEEL
HHHHHHTT STTTSH
EEE EEE
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Repeats regions & their secondary structure in the PDBID : 4y7n_C

>4y7n_C mol:protein length:318 DNA-directed RNA polymerase II subunit RPB3
165-191
KEHAK.WGPAAAIEFEyDPWNKLKHTDY
195-221
QDSAKeWPQSKNCEYE.DPPNEGDPFDY
TT GGxG EEEEE x TT TT S
S HHHxHS GGGSSxS TTS
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Repeats regions & their secondary structure in the PDBID : 4y7n_E

>4y7n_E mol:protein length:215 DNA-directed RNA polymerases I, II, and III s
31-60
TQEEV.ELP.LEDFKAKYCDSMGRPQRKMMSF
65-96
TEESIsKFPdMGSLWVEFCDEPSVGVKTMKTF
HHHHxT xHHHHHHHHB SSS B STTT
HHHHxHH xSS EEEEE SEE HHHHH
126-169
SIPPaTIETFNEAALVVNITHHELVpKHIRLSSDEKRelLKRYR
173-212
SQLP.RIQRADPVALYLGLKRGEVV.KIIRKSETSGR..YASYR
SSSxSEEEE STTTSS GGGSTTx EEEE HHHxxHHHHH
GGS xEE TT HHHHHHT TT ExEEEEEETTTEExxEEEEE
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Repeats regions & their secondary structure in the PDBID : 4y7n_F

>4y7n_F mol:protein length:155 DNA-directed RNA polymerases I, II, and III s
10-23
DGneNFEDFDVEHF
140-151
DG..SFEDWSVEEL
xx
TSxx EEEEETTTS
63-75
QIRRKTLKEKAIP
119-131
RIAMKELAEKKIP
HHHHHHHHTT
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Repeats regions & their secondary structure in the PDBID : 4y7n_H

>4y7n_H mol:protein length:146 DNA-directed RNA polymerases I, II, and III s
33-51
QDQcklTLDINVELFPVAA
52-70
QDSltvTIASSLNLEDTPA
TTxxx EEEEEE TTTS
T ExxxEEEEEES
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